Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 AL354751.1-201ENST00000412768 1863 ntBASIC21.55■■□□□ 1.04
NBPF3Q9H094 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NBPF3Q9H094 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.54■■□□□ 1.04
NBPF3Q9H094 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.54■■□□□ 1.04
NBPF3Q9H094 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.54■■□□□ 1.04
NBPF3Q9H094 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.54■■□□□ 1.04
NBPF3Q9H094 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.54■■□□□ 1.04
NBPF3Q9H094 GPR32P1-201ENST00000601788 811 ntBASIC21.54■■□□□ 1.04
NBPF3Q9H094 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.54■■□□□ 1.04
NBPF3Q9H094 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NBPF3Q9H094 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.54■■□□□ 1.04
NBPF3Q9H094 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 AC016734.2-201ENST00000624325 1377 ntBASIC21.53■■□□□ 1.04
NBPF3Q9H094 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 LINC00602-201ENST00000629776 2065 ntBASIC21.53■■□□□ 1.04
NBPF3Q9H094 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF3Q9H094 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.53■■□□□ 1.04
NBPF3Q9H094 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NBPF3Q9H094 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NBPF3Q9H094 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 TSSC2-201ENST00000450217 709 ntBASIC21.52■■□□□ 1.04
NBPF3Q9H094 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NBPF3Q9H094 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NBPF3Q9H094 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
NBPF3Q9H094 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NBPF3Q9H094 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
NBPF3Q9H094 AC120498.9-201ENST00000339021 3867 ntBASIC21.52■■□□□ 1.03
NBPF3Q9H094 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NBPF3Q9H094 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.51■■□□□ 1.03
NBPF3Q9H094 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.51■■□□□ 1.03
NBPF3Q9H094 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NBPF3Q9H094 AL022342.1-201ENST00000400363 863 ntBASIC21.51■■□□□ 1.03
NBPF3Q9H094 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.51■■□□□ 1.03
NBPF3Q9H094 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.51■■□□□ 1.03
NBPF3Q9H094 TSPY22P-201ENST00000427496 604 ntBASIC21.51■■□□□ 1.03
NBPF3Q9H094 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.51■■□□□ 1.03
NBPF3Q9H094 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NBPF3Q9H094 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF3Q9H094 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms