Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AP002414.3-201ENST00000589352 1468 ntBASIC22.02■■□□□ 1.12
RTFDC1Q9BY42 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
RTFDC1Q9BY42 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
RTFDC1Q9BY42 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTFDC1Q9BY42 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 LAGE3P1-201ENST00000425356 484 ntBASIC22■■□□□ 1.11
RTFDC1Q9BY42 AC004832.2-201ENST00000426397 482 ntBASIC22■■□□□ 1.11
RTFDC1Q9BY42 HMGN1P19-201ENST00000436976 333 ntBASIC22■■□□□ 1.11
RTFDC1Q9BY42 DNAJB3-201ENST00000446806 729 ntBASIC22■■□□□ 1.11
RTFDC1Q9BY42 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 AC097374.2-201ENST00000618617 1306 ntBASIC22■■□□□ 1.11
RTFDC1Q9BY42 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22■■□□□ 1.11
RTFDC1Q9BY42 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTFDC1Q9BY42 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 AL499627.1-201ENST00000569373 2188 ntBASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 PMS2P2-201ENST00000425039 1128 ntBASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTFDC1Q9BY42 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 AC009947.1-201ENST00000444350 727 ntBASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTFDC1Q9BY42 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms