Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 AC233702.5-201ENST00000584107 538 ntBASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 Z99916.2-201ENST00000604037 246 ntBASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 AP001412.1-201ENST00000608405 714 ntBASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.42■□□□□ 0.38
THUMPD3Q9BV44 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 AC012618.2-201ENST00000428058 849 ntBASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 AC026271.3-201ENST00000571884 352 ntBASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 AL049637.2-201ENST00000641778 930 ntBASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
THUMPD3Q9BV44 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 MIR564-202ENST00000385049 94 ntBASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 AC011506.1-201ENST00000474329 610 ntBASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 MIR6786-201ENST00000616843 113 ntBASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 AC113410.3-201ENST00000623366 203 ntBASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
THUMPD3Q9BV44 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
THUMPD3Q9BV44 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms