Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UPK3BQ9BT76 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 MTMR9LP-203ENST00000426597 1545 ntBASIC12.67□□□□□ -0.38
UPK3BQ9BT76 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 AL357033.4-201ENST00000617703 1807 ntBASIC12.67□□□□□ -0.38
UPK3BQ9BT76 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 AL645929.1-201ENST00000420084 975 ntBASIC12.67□□□□□ -0.38
UPK3BQ9BT76 UPK3BP1-201ENST00000428678 509 ntBASIC12.67□□□□□ -0.38
UPK3BQ9BT76 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.67□□□□□ -0.38
UPK3BQ9BT76 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UPK3BQ9BT76 PCDHB18P-201ENST00000524813 2368 ntBASIC12.66□□□□□ -0.38
UPK3BQ9BT76 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 SPDYE13P-201ENST00000445314 798 ntBASIC12.66□□□□□ -0.38
UPK3BQ9BT76 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 AC092597.1-201ENST00000487352 616 ntBASIC12.66□□□□□ -0.38
UPK3BQ9BT76 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 AC069148.1-201ENST00000608741 768 ntBASIC12.66□□□□□ -0.38
UPK3BQ9BT76 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UPK3BQ9BT76 AL356309.3-201ENST00000624132 1934 ntBASIC12.66□□□□□ -0.38
UPK3BQ9BT76 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms