Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.37■□□□□ 0.37
CMKLR1Q99788 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMKLR1Q99788 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 KRT18P67-201ENST00000432816 1264 ntBASIC17.36■□□□□ 0.37
CMKLR1Q99788 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 TP73-AS1-207ENST00000624167 988 ntBASIC17.36■□□□□ 0.37
CMKLR1Q99788 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CMKLR1Q99788 AC098818.2-201ENST00000564925 2320 ntBASIC17.36■□□□□ 0.37
CMKLR1Q99788 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMKLR1Q99788 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC132008.2-207ENST00000454517 770 ntBASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC008608.2-201ENST00000606089 416 ntBASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC006538.3-201ENST00000612495 578 ntBASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC117500.6-201ENST00000624871 588 ntBASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 AC112777.1-201ENST00000540175 1423 ntBASIC17.35■□□□□ 0.37
CMKLR1Q99788 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 BX323043.1-201ENST00000641006 1765 ntBASIC17.35■□□□□ 0.37
CMKLR1Q99788 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMKLR1Q99788 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.35■□□□□ 0.37
CMKLR1Q99788 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMKLR1Q99788 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMKLR1Q99788 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMKLR1Q99788 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMKLR1Q99788 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMKLR1Q99788 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.34■□□□□ 0.37
CMKLR1Q99788 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CMKLR1Q99788 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMKLR1Q99788 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms