Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
BBS4Q96RK4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
BBS4Q96RK4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BBS4Q96RK4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
BBS4Q96RK4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BBS4Q96RK4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.27■□□□□ 0.35
BBS4Q96RK4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.27■□□□□ 0.35
BBS4Q96RK4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.26■□□□□ 0.35
BBS4Q96RK4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.26■□□□□ 0.35
BBS4Q96RK4 SEC1P-202ENST00000473944 940 ntBASIC17.26■□□□□ 0.35
BBS4Q96RK4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 AC133561.5-201ENST00000635547 218 ntBASIC17.26■□□□□ 0.35
BBS4Q96RK4 AC092865.7-201ENST00000641832 219 ntBASIC17.26■□□□□ 0.35
BBS4Q96RK4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS4Q96RK4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.26■□□□□ 0.35
BBS4Q96RK4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 SLC25A3P1-201ENST00000443844 931 ntBASIC17.25■□□□□ 0.35
BBS4Q96RK4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 AC073912.3-201ENST00000624414 853 ntBASIC17.25■□□□□ 0.35
BBS4Q96RK4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.25■□□□□ 0.35
BBS4Q96RK4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BBS4Q96RK4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 AC141257.4-201ENST00000634557 245 ntBASIC17.24■□□□□ 0.35
BBS4Q96RK4 AC136944.6-201ENST00000634818 245 ntBASIC17.24■□□□□ 0.35
BBS4Q96RK4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.24■□□□□ 0.35
BBS4Q96RK4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BBS4Q96RK4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms