Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MST1L-201ENST00000442552 2185 ntBASIC13.76□□□□□ -0.21
AP1S3Q96PC3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 AC073592.3-201ENST00000625118 1834 ntBASIC13.76□□□□□ -0.21
AP1S3Q96PC3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 AL162741.1-201ENST00000565563 1558 ntBASIC13.76□□□□□ -0.21
AP1S3Q96PC3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 AC105036.2-201ENST00000569468 176 ntBASIC13.76□□□□□ -0.21
AP1S3Q96PC3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP1S3Q96PC3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.75□□□□□ -0.21
AP1S3Q96PC3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP1S3Q96PC3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP1S3Q96PC3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms