Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 AC093677.2-201ENST00000600169 1863 ntBASIC17.2■□□□□ 0.34
COL21A1Q96P44 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 TERF1P1-201ENST00000311003 1181 ntBASIC17.19■□□□□ 0.34
COL21A1Q96P44 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 AC005521.1-201ENST00000393351 872 ntBASIC17.19■□□□□ 0.34
COL21A1Q96P44 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.19■□□□□ 0.34
COL21A1Q96P44 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 ESPNP-201ENST00000270691 2015 ntBASIC17.19■□□□□ 0.34
COL21A1Q96P44 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL21A1Q96P44 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.18■□□□□ 0.34
COL21A1Q96P44 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 PRORSD1P-202ENST00000563365 2154 ntBASIC17.18■□□□□ 0.34
COL21A1Q96P44 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.18■□□□□ 0.34
COL21A1Q96P44 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL21A1Q96P44 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL21A1Q96P44 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
COL21A1Q96P44 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.17■□□□□ 0.34
COL21A1Q96P44 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
COL21A1Q96P44 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL21A1Q96P44 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms