Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.06■□□□□ 0.8
RPGRIP1Q96KN7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPGRIP1Q96KN7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 NEK4P2-201ENST00000580004 1012 ntBASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 BCL2-203ENST00000589955 5011 ntBASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPGRIP1Q96KN7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 UNC93B7-201ENST00000509439 705 ntBASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms