Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CHAMP1Q96JM3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 CROCCP2-202ENST00000412962 2773 ntBASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 FSCN1P1-201ENST00000568912 1481 ntBASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 AC124067.4-201ENST00000519691 2379 ntBASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHAMP1Q96JM3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 SIRPAP1-201ENST00000448467 1770 ntBASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 AP001094.4-201ENST00000579008 2176 ntBASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHAMP1Q96JM3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.08■□□□□ 0.96
CHAMP1Q96JM3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHAMP1Q96JM3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CHAMP1Q96JM3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHAMP1Q96JM3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHAMP1Q96JM3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHAMP1Q96JM3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CHAMP1Q96JM3 AC093010.1-201ENST00000473625 1624 ntBASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 AIRN-201ENST00000601203 4374 ntBASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 AP000593.1-201ENST00000393668 712 ntBASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 AC011676.5-201ENST00000624864 2660 ntBASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 AD000864.1-201ENST00000624076 2295 ntBASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.07■□□□□ 0.96
CHAMP1Q96JM3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHAMP1Q96JM3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms