Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 AP000523.1-201ENST00000398242 1049 ntBASIC18.54■□□□□ 0.56
RTP4Q96DX8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 LINC00167-201ENST00000530583 1419 ntBASIC18.54■□□□□ 0.56
RTP4Q96DX8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.54■□□□□ 0.56
RTP4Q96DX8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTP4Q96DX8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 LIN28AP1-201ENST00000429574 405 ntBASIC18.53■□□□□ 0.56
RTP4Q96DX8 AC104076.2-201ENST00000448912 469 ntBASIC18.53■□□□□ 0.56
RTP4Q96DX8 DUX4L26-201ENST00000489078 1255 ntBASIC18.53■□□□□ 0.56
RTP4Q96DX8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTP4Q96DX8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
RTP4Q96DX8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 ATP5G1P1-201ENST00000448724 379 ntBASIC18.52■□□□□ 0.56
RTP4Q96DX8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 AL138966.2-201ENST00000621997 464 ntBASIC18.52■□□□□ 0.56
RTP4Q96DX8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.52■□□□□ 0.56
RTP4Q96DX8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTP4Q96DX8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTP4Q96DX8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTP4Q96DX8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTP4Q96DX8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RTP4Q96DX8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
RTP4Q96DX8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
RTP4Q96DX8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
RTP4Q96DX8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RTP4Q96DX8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RTP4Q96DX8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.51■□□□□ 0.55
RTP4Q96DX8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTP4Q96DX8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms