Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1AQ96BI3 AL020996.1-203ENST00000536896 2307 ntBASIC16.11■□□□□ 0.17
APH1AQ96BI3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1AQ96BI3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1AQ96BI3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 LINC01126-201ENST00000623515 1646 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 TSPY22P-201ENST00000427496 604 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 UPK3BP1-201ENST00000428678 509 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 BX276092.5-203ENST00000456199 560 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 AC113404.2-201ENST00000507884 177 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 AL121672.3-201ENST00000608644 468 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 AC069148.1-201ENST00000608741 768 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 AC090164.3-201ENST00000610780 2143 ntBASIC16.1■□□□□ 0.17
APH1AQ96BI3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.1■□□□□ 0.17
APH1AQ96BI3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1AQ96BI3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 KRT8P26-201ENST00000534154 1276 ntBASIC16.09■□□□□ 0.17
APH1AQ96BI3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 AL390719.2-201ENST00000606993 987 ntBASIC16.09■□□□□ 0.17
APH1AQ96BI3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1AQ96BI3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.09■□□□□ 0.17
APH1AQ96BI3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
APH1AQ96BI3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
APH1AQ96BI3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
APH1AQ96BI3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
APH1AQ96BI3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
APH1AQ96BI3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
APH1AQ96BI3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
APH1AQ96BI3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.08■□□□□ 0.16
APH1AQ96BI3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
APH1AQ96BI3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms