Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 AC011498.5-201ENST00000592027 486 ntBASIC16.32■□□□□ 0.2
CPNE4Q96A23 GPR32P1-201ENST00000601788 811 ntBASIC16.32■□□□□ 0.2
CPNE4Q96A23 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 NOC2LP1-202ENST00000452600 2235 ntBASIC16.31■□□□□ 0.2
CPNE4Q96A23 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.31■□□□□ 0.2
CPNE4Q96A23 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE4Q96A23 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE4Q96A23 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 IGHGP-201ENST00000390555 1178 ntBASIC16.3■□□□□ 0.2
CPNE4Q96A23 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.3■□□□□ 0.2
CPNE4Q96A23 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE4Q96A23 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE4Q96A23 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms