Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HPS1Q92902 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS1Q92902 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS1Q92902 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HPS1Q92902 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HPS1Q92902 FAM210CP-201ENST00000445714 574 ntBASIC16.65■□□□□ 0.26
HPS1Q92902 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HPS1Q92902 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS1Q92902 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HPS1Q92902 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HPS1Q92902 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 AP006587.1-201ENST00000534129 1502 ntBASIC16.65■□□□□ 0.26
HPS1Q92902 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HPS1Q92902 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.65■□□□□ 0.26
HPS1Q92902 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HPS1Q92902 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HPS1Q92902 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.64■□□□□ 0.26
HPS1Q92902 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HPS1Q92902 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
HPS1Q92902 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HPS1Q92902 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 AC022211.2-201ENST00000585075 2527 ntBASIC16.64■□□□□ 0.25
HPS1Q92902 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HPS1Q92902 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HPS1Q92902 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS1Q92902 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.64■□□□□ 0.25
HPS1Q92902 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HPS1Q92902 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS1Q92902 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS1Q92902 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 AC004264.1-201ENST00000608354 794 ntBASIC16.64■□□□□ 0.25
HPS1Q92902 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS1Q92902 NBPF21P-201ENST00000425093 1451 ntBASIC16.64■□□□□ 0.25
HPS1Q92902 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HPS1Q92902 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS1Q92902 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS1Q92902 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS1Q92902 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.64■□□□□ 0.25
HPS1Q92902 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS1Q92902 TFP1-202ENST00000475455 1573 ntBASIC16.64■□□□□ 0.25
HPS1Q92902 UBALD1-205ENST00000590891 2641 ntBASIC16.64■□□□□ 0.25
HPS1Q92902 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPS1Q92902 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.64■□□□□ 0.25
HPS1Q92902 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HPS1Q92902 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.63■□□□□ 0.25
HPS1Q92902 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.63■□□□□ 0.25
HPS1Q92902 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS1Q92902 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.63■□□□□ 0.25
HPS1Q92902 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HPS1Q92902 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.63■□□□□ 0.25
HPS1Q92902 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HPS1Q92902 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms