Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.56■□□□□ 0.72
SEMA4DQ92854 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SEMA4DQ92854 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.56■□□□□ 0.72
SEMA4DQ92854 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.56■□□□□ 0.72
SEMA4DQ92854 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA4DQ92854 AC008764.6-201ENST00000595909 2069 ntBASIC19.56■□□□□ 0.72
SEMA4DQ92854 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA4DQ92854 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA4DQ92854 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA4DQ92854 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
SEMA4DQ92854 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SEMA4DQ92854 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA4DQ92854 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.56■□□□□ 0.72
SEMA4DQ92854 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SEMA4DQ92854 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 LINC00602-201ENST00000629776 2065 ntBASIC19.55■□□□□ 0.72
SEMA4DQ92854 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 MIR662-201ENST00000384847 95 ntBASIC19.55■□□□□ 0.72
SEMA4DQ92854 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.55■□□□□ 0.72
SEMA4DQ92854 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.55■□□□□ 0.72
SEMA4DQ92854 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 FLJ13224-201ENST00000313737 1514 ntBASIC19.55■□□□□ 0.72
SEMA4DQ92854 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEMA4DQ92854 NOC2LP2-201ENST00000407594 1944 ntBASIC19.55■□□□□ 0.72
SEMA4DQ92854 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 AC068880.1-201ENST00000507289 2297 ntBASIC19.54■□□□□ 0.72
SEMA4DQ92854 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 AL671277.2-201ENST00000458060 996 ntBASIC19.54■□□□□ 0.72
SEMA4DQ92854 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 AL049597.2-201ENST00000565575 961 ntBASIC19.54■□□□□ 0.72
SEMA4DQ92854 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEMA4DQ92854 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SEMA4DQ92854 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA4DQ92854 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA4DQ92854 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA4DQ92854 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA4DQ92854 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA4DQ92854 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA4DQ92854 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA4DQ92854 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 AC113404.2-201ENST00000507884 177 ntBASIC19.53■□□□□ 0.72
SEMA4DQ92854 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 NTF6B-201ENST00000591913 560 ntBASIC19.53■□□□□ 0.72
SEMA4DQ92854 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SEMA4DQ92854 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEMA4DQ92854 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms