Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.34■■□□□ 1.17
RPGRQ92834 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.34■■□□□ 1.17
RPGRQ92834 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.34■■□□□ 1.17
RPGRQ92834 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.34■■□□□ 1.17
RPGRQ92834 RNA5SP415-201ENST00000517246 115 ntBASIC22.34■■□□□ 1.17
RPGRQ92834 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
RPGRQ92834 AL691403.2-201ENST00000618460 490 ntBASIC22.34■■□□□ 1.17
RPGRQ92834 AC008735.5-201ENST00000623544 497 ntBASIC22.34■■□□□ 1.17
RPGRQ92834 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.33■■□□□ 1.17
RPGRQ92834 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RPGRQ92834 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.17
RPGRQ92834 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.33■■□□□ 1.17
RPGRQ92834 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.33■■□□□ 1.17
RPGRQ92834 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.33■■□□□ 1.17
RPGRQ92834 NKAPP1-205ENST00000585790 367 ntBASIC22.33■■□□□ 1.17
RPGRQ92834 MTDHP4-201ENST00000600287 670 ntBASIC22.33■■□□□ 1.17
RPGRQ92834 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RPGRQ92834 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.33■■□□□ 1.17
RPGRQ92834 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RPGRQ92834 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.33■■□□□ 1.16
RPGRQ92834 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RPGRQ92834 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
RPGRQ92834 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RPGRQ92834 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RPGRQ92834 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RPGRQ92834 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
RPGRQ92834 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RPGRQ92834 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.32■■□□□ 1.16
RPGRQ92834 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
RPGRQ92834 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.32■■□□□ 1.16
RPGRQ92834 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
RPGRQ92834 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RPGRQ92834 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.32■■□□□ 1.16
RPGRQ92834 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.32■■□□□ 1.16
RPGRQ92834 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
RPGRQ92834 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.31■■□□□ 1.16
RPGRQ92834 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RPGRQ92834 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RPGRQ92834 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.31■■□□□ 1.16
RPGRQ92834 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.31■■□□□ 1.16
RPGRQ92834 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RPGRQ92834 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.31■■□□□ 1.16
RPGRQ92834 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.31■■□□□ 1.16
RPGRQ92834 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.31■■□□□ 1.16
RPGRQ92834 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.31■■□□□ 1.16
RPGRQ92834 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.31■■□□□ 1.16
RPGRQ92834 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.31■■□□□ 1.16
RPGRQ92834 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.31■■□□□ 1.16
RPGRQ92834 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RPGRQ92834 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RPGRQ92834 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.3■■□□□ 1.16
RPGRQ92834 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.3■■□□□ 1.16
RPGRQ92834 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RPGRQ92834 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.3■■□□□ 1.16
RPGRQ92834 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RPGRQ92834 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 KRT18P3-201ENST00000451602 1288 ntBASIC22.3■■□□□ 1.16
RPGRQ92834 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.3■■□□□ 1.16
RPGRQ92834 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 AC105339.3-201ENST00000560043 636 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms