Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TOPBP1Q92547 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TOPBP1Q92547 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 VN2R19P-201ENST00000442399 1052 ntBASIC30.29■■■□□ 2.44
TOPBP1Q92547 CEND1P1-201ENST00000451006 455 ntBASIC30.29■■■□□ 2.44
TOPBP1Q92547 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 IGHV3-65-201ENST00000523210 341 ntBASIC30.29■■■□□ 2.44
TOPBP1Q92547 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 COX5A-202ENST00000562233 441 ntTSL 3 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TOPBP1Q92547 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC30.29■■■□□ 2.44
TOPBP1Q92547 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOPBP1Q92547 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC30.28■■■□□ 2.44
TOPBP1Q92547 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC30.28■■■□□ 2.44
TOPBP1Q92547 PRR29-209ENST00000582540 967 ntTSL 2 BASIC30.28■■■□□ 2.44
TOPBP1Q92547 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC30.28■■■□□ 2.44
TOPBP1Q92547 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOPBP1Q92547 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TOPBP1Q92547 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC30.28■■■□□ 2.44
TOPBP1Q92547 AC148477.5-201ENST00000625164 1645 ntBASIC30.28■■■□□ 2.44
TOPBP1Q92547 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC30.28■■■□□ 2.44
TOPBP1Q92547 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC30.28■■■□□ 2.44
TOPBP1Q92547 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 METTL26-205ENST00000397666 726 ntTSL 2 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TOPBP1Q92547 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 PRSS29P-201ENST00000440800 595 ntBASIC30.27■■■□□ 2.44
TOPBP1Q92547 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 METTL23-205ENST00000588302 925 ntTSL 5 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOPBP1Q92547 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOPBP1Q92547 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOPBP1Q92547 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TOPBP1Q92547 AC132938.6-201ENST00000623828 1655 ntBASIC30.27■■■□□ 2.44
TOPBP1Q92547 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TOPBP1Q92547 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOPBP1Q92547 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOPBP1Q92547 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC30.27■■■□□ 2.44
TOPBP1Q92547 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
TOPBP1Q92547 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
TOPBP1Q92547 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
TOPBP1Q92547 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOPBP1Q92547 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOPBP1Q92547 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC30.26■■■□□ 2.43
TOPBP1Q92547 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOPBP1Q92547 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC30.26■■■□□ 2.43
TOPBP1Q92547 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOPBP1Q92547 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC30.26■■■□□ 2.43
TOPBP1Q92547 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
TOPBP1Q92547 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOPBP1Q92547 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
TOPBP1Q92547 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOPBP1Q92547 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOPBP1Q92547 KRT8P47-201ENST00000604727 1398 ntBASIC30.25■■■□□ 2.43
TOPBP1Q92547 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOPBP1Q92547 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC30.25■■■□□ 2.43
TOPBP1Q92547 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC30.25■■■□□ 2.43
TOPBP1Q92547 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOPBP1Q92547 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC30.25■■■□□ 2.43
TOPBP1Q92547 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC30.25■■■□□ 2.43
TOPBP1Q92547 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC30.25■■■□□ 2.43
TOPBP1Q92547 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
TOPBP1Q92547 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOPBP1Q92547 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOPBP1Q92547 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
TOPBP1Q92547 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC30.24■■■□□ 2.43
TOPBP1Q92547 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC30.24■■■□□ 2.43
TOPBP1Q92547 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
TOPBP1Q92547 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC30.24■■■□□ 2.43
TOPBP1Q92547 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TOPBP1Q92547 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC30.23■■■□□ 2.43
TOPBP1Q92547 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
TOPBP1Q92547 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC30.23■■■□□ 2.43
TOPBP1Q92547 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC30.23■■■□□ 2.43
TOPBP1Q92547 RPS15P9-201ENST00000494093 319 ntBASIC30.23■■■□□ 2.43
TOPBP1Q92547 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC30.23■■■□□ 2.43
TOPBP1Q92547 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TOPBP1Q92547 AC010654.1-201ENST00000615722 808 ntBASIC30.23■■■□□ 2.43
TOPBP1Q92547 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC30.23■■■□□ 2.43
TOPBP1Q92547 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC30.23■■■□□ 2.43
TOPBP1Q92547 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms