Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 NUS1P2-201ENST00000417358 873 ntBASIC23.67■■□□□ 1.38
RTF1Q92541 KRT18P65-201ENST00000439811 1286 ntBASIC23.67■■□□□ 1.38
RTF1Q92541 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.67■■□□□ 1.38
RTF1Q92541 MTCL1P1-201ENST00000446207 792 ntBASIC23.67■■□□□ 1.38
RTF1Q92541 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTF1Q92541 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.67■■□□□ 1.38
RTF1Q92541 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.67■■□□□ 1.38
RTF1Q92541 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.67■■□□□ 1.38
RTF1Q92541 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTF1Q92541 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RTF1Q92541 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTF1Q92541 AC098818.2-201ENST00000564925 2320 ntBASIC23.67■■□□□ 1.38
RTF1Q92541 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTF1Q92541 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.67■■□□□ 1.38
RTF1Q92541 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.67■■□□□ 1.38
RTF1Q92541 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTF1Q92541 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTF1Q92541 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTF1Q92541 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.66■■□□□ 1.38
RTF1Q92541 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
RTF1Q92541 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RTF1Q92541 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTF1Q92541 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.66■■□□□ 1.38
RTF1Q92541 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTF1Q92541 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
RTF1Q92541 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
RTF1Q92541 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.66■■□□□ 1.38
RTF1Q92541 POM121L3P-201ENST00000419331 1163 ntBASIC23.66■■□□□ 1.38
RTF1Q92541 FAAHP1-202ENST00000446499 1238 ntBASIC23.66■■□□□ 1.38
RTF1Q92541 KRT16P4-201ENST00000453883 522 ntBASIC23.66■■□□□ 1.38
RTF1Q92541 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.66■■□□□ 1.38
RTF1Q92541 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.66■■□□□ 1.38
RTF1Q92541 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.66■■□□□ 1.38
RTF1Q92541 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.66■■□□□ 1.38
RTF1Q92541 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTF1Q92541 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTF1Q92541 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTF1Q92541 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RTF1Q92541 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RTF1Q92541 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.65■■□□□ 1.38
RTF1Q92541 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.65■■□□□ 1.38
RTF1Q92541 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.65■■□□□ 1.38
RTF1Q92541 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.65■■□□□ 1.38
RTF1Q92541 EMBP1-201ENST00000458200 901 ntBASIC23.65■■□□□ 1.38
RTF1Q92541 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.65■■□□□ 1.38
RTF1Q92541 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.65■■□□□ 1.38
RTF1Q92541 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.65■■□□□ 1.38
RTF1Q92541 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTF1Q92541 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.65■■□□□ 1.38
RTF1Q92541 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTF1Q92541 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RTF1Q92541 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTF1Q92541 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTF1Q92541 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RTF1Q92541 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RTF1Q92541 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.64■■□□□ 1.38
RTF1Q92541 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.64■■□□□ 1.37
RTF1Q92541 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RTF1Q92541 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.64■■□□□ 1.37
RTF1Q92541 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.64■■□□□ 1.37
RTF1Q92541 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTF1Q92541 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
RTF1Q92541 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.63■■□□□ 1.37
RTF1Q92541 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.63■■□□□ 1.37
RTF1Q92541 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RTF1Q92541 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
RTF1Q92541 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.63■■□□□ 1.37
RTF1Q92541 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.63■■□□□ 1.37
RTF1Q92541 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 BNIP3P18-201ENST00000593976 575 ntBASIC23.63■■□□□ 1.37
RTF1Q92541 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTF1Q92541 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RTF1Q92541 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms