Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 AC096733.2-201ENST00000609937 1394 ntBASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 KRT8P3-201ENST00000519669 1449 ntBASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 FLJ13224-201ENST00000313737 1514 ntBASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 TSPY7P-201ENST00000431358 1114 ntBASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 SLC25A1P4-201ENST00000567977 778 ntBASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RTN4IP1Q8WWV3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 AC012317.2-201ENST00000623305 2251 ntBASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RTN4IP1Q8WWV3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 AC097488.1-201ENST00000507834 756 ntBASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.33■□□□□ 0.04
RTN4IP1Q8WWV3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 MYLKP1-201ENST00000509077 1580 ntBASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 MFAP1P1-201ENST00000442257 1255 ntBASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 SNORA78-201ENST00000459373 127 ntBASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms