Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 RASA4DP-201ENST00000460726 1199 ntBASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HMGCLL1Q8TB92 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 AC020763.4-201ENST00000623414 4170 ntBASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGCLL1Q8TB92 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
HMGCLL1Q8TB92 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 SPDYE15P-201ENST00000424157 909 ntBASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 AL049597.2-201ENST00000565575 961 ntBASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 AL157888.1-201ENST00000631930 593 ntBASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGCLL1Q8TB92 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 AC009102.3-201ENST00000623118 1491 ntBASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms