Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLHC1Q8NHS4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CLHC1Q8NHS4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CLHC1Q8NHS4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLHC1Q8NHS4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLHC1Q8NHS4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLHC1Q8NHS4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLHC1Q8NHS4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLHC1Q8NHS4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 GNAS-203ENST00000306120 1878 ntBASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 MIR149-201ENST00000384879 89 ntBASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 MIR718-201ENST00000390190 70 ntBASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 SLC25A1P2-201ENST00000430693 912 ntBASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLHC1Q8NHS4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 FLJ13224-201ENST00000313737 1514 ntBASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 LINC00896-202ENST00000609602 2128 ntBASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 TSPY17P-201ENST00000450329 467 ntBASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 AL355075.4-201ENST00000554988 638 ntBASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 FITM1-202ENST00000559294 800 ntBASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 AC092338.2-201ENST00000568827 1415 ntBASIC17.47■□□□□ 0.39
CLHC1Q8NHS4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 AC012317.2-201ENST00000623305 2251 ntBASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.46■□□□□ 0.39
CLHC1Q8NHS4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms