Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.71■□□□□ 0.27
SETD9Q8NE22 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SETD9Q8NE22 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SETD9Q8NE22 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.71■□□□□ 0.26
SETD9Q8NE22 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SETD9Q8NE22 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SETD9Q8NE22 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SETD9Q8NE22 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
SETD9Q8NE22 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 Z85996.1-201ENST00000494644 937 ntBASIC16.7■□□□□ 0.26
SETD9Q8NE22 AC091874.3-201ENST00000512672 1195 ntBASIC16.7■□□□□ 0.26
SETD9Q8NE22 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 PRKY-204ENST00000533551 1019 ntBASIC16.7■□□□□ 0.26
SETD9Q8NE22 PNMA6B-201ENST00000538162 1200 ntBASIC16.7■□□□□ 0.26
SETD9Q8NE22 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 AC004264.1-201ENST00000608354 794 ntBASIC16.7■□□□□ 0.26
SETD9Q8NE22 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.7■□□□□ 0.26
SETD9Q8NE22 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SETD9Q8NE22 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SETD9Q8NE22 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.69■□□□□ 0.26
SETD9Q8NE22 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.69■□□□□ 0.26
SETD9Q8NE22 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms