Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.86■□□□□ 0.61
SCML4Q8N228 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 ABALON-201ENST00000629058 1903 ntBASIC18.86■□□□□ 0.61
SCML4Q8N228 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.86■□□□□ 0.61
SCML4Q8N228 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.86■□□□□ 0.61
SCML4Q8N228 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.86■□□□□ 0.61
SCML4Q8N228 AC233702.3-201ENST00000578656 1387 ntBASIC18.86■□□□□ 0.61
SCML4Q8N228 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
SCML4Q8N228 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SCML4Q8N228 AC112698.1-201ENST00000510299 916 ntBASIC18.86■□□□□ 0.61
SCML4Q8N228 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SCML4Q8N228 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.86■□□□□ 0.61
SCML4Q8N228 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.86■□□□□ 0.61
SCML4Q8N228 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.86■□□□□ 0.61
SCML4Q8N228 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.86■□□□□ 0.61
SCML4Q8N228 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SCML4Q8N228 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.86■□□□□ 0.61
SCML4Q8N228 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCML4Q8N228 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SCML4Q8N228 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SCML4Q8N228 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SCML4Q8N228 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 AC120498.9-201ENST00000339021 3867 ntBASIC18.85■□□□□ 0.61
SCML4Q8N228 FLJ13224-201ENST00000313737 1514 ntBASIC18.85■□□□□ 0.61
SCML4Q8N228 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.85■□□□□ 0.61
SCML4Q8N228 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.85■□□□□ 0.61
SCML4Q8N228 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.85■□□□□ 0.61
SCML4Q8N228 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.85■□□□□ 0.61
SCML4Q8N228 AC011840.4-201ENST00000578471 627 ntBASIC18.85■□□□□ 0.61
SCML4Q8N228 AC092119.3-201ENST00000612618 583 ntBASIC18.85■□□□□ 0.61
SCML4Q8N228 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.85■□□□□ 0.61
SCML4Q8N228 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SCML4Q8N228 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.85■□□□□ 0.61
SCML4Q8N228 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.85■□□□□ 0.61
SCML4Q8N228 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 AC135050.7-201ENST00000624508 2218 ntBASIC18.85■□□□□ 0.61
SCML4Q8N228 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCML4Q8N228 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
SCML4Q8N228 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 AL354751.1-201ENST00000412768 1863 ntBASIC18.84■□□□□ 0.61
SCML4Q8N228 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.84■□□□□ 0.61
SCML4Q8N228 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.84■□□□□ 0.61
SCML4Q8N228 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.84■□□□□ 0.61
SCML4Q8N228 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 VENTXP7-201ENST00000475503 772 ntBASIC18.84■□□□□ 0.61
SCML4Q8N228 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.84■□□□□ 0.61
SCML4Q8N228 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.84■□□□□ 0.61
SCML4Q8N228 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SCML4Q8N228 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCML4Q8N228 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
SCML4Q8N228 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCML4Q8N228 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SCML4Q8N228 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.83■□□□□ 0.61
SCML4Q8N228 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.83■□□□□ 0.61
SCML4Q8N228 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCML4Q8N228 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCML4Q8N228 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCML4Q8N228 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms