Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC139887.4-201ENST00000607877 719 ntBASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 AC011558.1-201ENST00000623459 338 ntBASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 AL024508.2-201ENST00000607749 1894 ntBASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 AL441883.1-201ENST00000566170 1045 ntBASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC116Q8IYX3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC116Q8IYX3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CCDC116Q8IYX3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC116Q8IYX3 AC138028.4-201ENST00000564984 1845 ntBASIC17.14■□□□□ 0.34
CCDC116Q8IYX3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 YBX1P2-201ENST00000489612 999 ntBASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 AC034232.1-201ENST00000506026 1064 ntBASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC116Q8IYX3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms