Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC138028.4-201ENST00000564984 1845 ntBASIC17.06■□□□□ 0.32
CCDC71Q8IV32 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.06■□□□□ 0.32
CCDC71Q8IV32 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 AC068587.9-201ENST00000641814 219 ntBASIC17.06■□□□□ 0.32
CCDC71Q8IV32 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 AC080080.1-201ENST00000625121 2420 ntBASIC17.06■□□□□ 0.32
CCDC71Q8IV32 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC71Q8IV32 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.05■□□□□ 0.32
CCDC71Q8IV32 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 SLC25A6P5-201ENST00000435663 894 ntBASIC17.05■□□□□ 0.32
CCDC71Q8IV32 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 AC140113.3-201ENST00000605663 199 ntBASIC17.05■□□□□ 0.32
CCDC71Q8IV32 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71Q8IV32 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 CKBP1-201ENST00000565489 1086 ntBASIC17.04■□□□□ 0.32
CCDC71Q8IV32 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 AL023973.1-201ENST00000624619 620 ntBASIC17.04■□□□□ 0.32
CCDC71Q8IV32 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 KRT8P41-201ENST00000533985 1514 ntBASIC17.04■□□□□ 0.32
CCDC71Q8IV32 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 AC106820.2-201ENST00000563775 3264 ntBASIC17.04■□□□□ 0.32
CCDC71Q8IV32 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71Q8IV32 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC71Q8IV32 AP003041.3-201ENST00000527151 707 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms