Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL161938.1-201ENST00000569833 2180 ntBASIC19.27■□□□□ 0.68
RNF135Q8IUD6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF135Q8IUD6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF135Q8IUD6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 AC098831.1-202ENST00000438821 336 ntBASIC19.26■□□□□ 0.67
RNF135Q8IUD6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 AC091607.1-201ENST00000490318 1060 ntBASIC19.26■□□□□ 0.67
RNF135Q8IUD6 PGAM5P1-201ENST00000518923 814 ntBASIC19.26■□□□□ 0.67
RNF135Q8IUD6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 AC010240.3-201ENST00000607688 395 ntBASIC19.26■□□□□ 0.67
RNF135Q8IUD6 MIR7706-201ENST00000613747 67 ntBASIC19.26■□□□□ 0.67
RNF135Q8IUD6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF135Q8IUD6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.25■□□□□ 0.67
RNF135Q8IUD6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 POM121L3P-201ENST00000419331 1163 ntBASIC19.25■□□□□ 0.67
RNF135Q8IUD6 UPF3AP3-201ENST00000420996 769 ntBASIC19.25■□□□□ 0.67
RNF135Q8IUD6 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.25■□□□□ 0.67
RNF135Q8IUD6 KRT18P23-201ENST00000435622 1283 ntBASIC19.25■□□□□ 0.67
RNF135Q8IUD6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 AC018712.1-201ENST00000455767 687 ntBASIC19.25■□□□□ 0.67
RNF135Q8IUD6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 AP001160.2-201ENST00000596071 487 ntBASIC19.25■□□□□ 0.67
RNF135Q8IUD6 AL591684.3-201ENST00000605187 298 ntBASIC19.25■□□□□ 0.67
RNF135Q8IUD6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF135Q8IUD6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF135Q8IUD6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF135Q8IUD6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF135Q8IUD6 FEM1AP3-201ENST00000403722 1741 ntBASIC19.23■□□□□ 0.67
RNF135Q8IUD6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms