Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 IRX1P1-201ENST00000438849 1838 ntBASIC17.37■□□□□ 0.37
RAB43Q86YS6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 FP475955.4-201ENST00000623131 1990 ntBASIC17.37■□□□□ 0.37
RAB43Q86YS6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 MIR662-201ENST00000384847 95 ntBASIC17.37■□□□□ 0.37
RAB43Q86YS6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 AC009065.1-201ENST00000564055 1225 ntBASIC17.37■□□□□ 0.37
RAB43Q86YS6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 AC016734.2-201ENST00000624325 1377 ntBASIC17.37■□□□□ 0.37
RAB43Q86YS6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB43Q86YS6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB43Q86YS6 AC104581.1-202ENST00000635932 2618 ntBASIC17.36■□□□□ 0.37
RAB43Q86YS6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 CHCHD2P8-201ENST00000429873 447 ntBASIC17.36■□□□□ 0.37
RAB43Q86YS6 MIR3180-4-201ENST00000582223 153 ntBASIC17.36■□□□□ 0.37
RAB43Q86YS6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB43Q86YS6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RAB43Q86YS6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 TSPY22P-201ENST00000427496 604 ntBASIC17.35■□□□□ 0.37
RAB43Q86YS6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 AC012313.10-201ENST00000623509 926 ntBASIC17.35■□□□□ 0.37
RAB43Q86YS6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB43Q86YS6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 AC141586.3-201ENST00000562166 1838 ntBASIC17.35■□□□□ 0.37
RAB43Q86YS6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms