Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.17■□□□□ 0.5
LDB1Q86U70 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LDB1Q86U70 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.17■□□□□ 0.5
LDB1Q86U70 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.17■□□□□ 0.5
LDB1Q86U70 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.17■□□□□ 0.5
LDB1Q86U70 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.17■□□□□ 0.5
LDB1Q86U70 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.17■□□□□ 0.5
LDB1Q86U70 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.17■□□□□ 0.5
LDB1Q86U70 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 AC139887.4-201ENST00000607877 719 ntBASIC18.17■□□□□ 0.5
LDB1Q86U70 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LDB1Q86U70 AC092865.7-201ENST00000641832 219 ntBASIC18.17■□□□□ 0.5
LDB1Q86U70 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.17■□□□□ 0.5
LDB1Q86U70 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.17■□□□□ 0.5
LDB1Q86U70 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.17■□□□□ 0.5
LDB1Q86U70 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB1Q86U70 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.16■□□□□ 0.5
LDB1Q86U70 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 AC073508.3-201ENST00000619697 1419 ntBASIC18.16■□□□□ 0.5
LDB1Q86U70 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
LDB1Q86U70 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.16■□□□□ 0.5
LDB1Q86U70 PCDHB18P-201ENST00000524813 2368 ntBASIC18.16■□□□□ 0.5
LDB1Q86U70 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LDB1Q86U70 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.16■□□□□ 0.5
LDB1Q86U70 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.16■□□□□ 0.5
LDB1Q86U70 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LDB1Q86U70 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.16■□□□□ 0.5
LDB1Q86U70 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 AC009065.1-201ENST00000564055 1225 ntBASIC18.16■□□□□ 0.5
LDB1Q86U70 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.16■□□□□ 0.5
LDB1Q86U70 AC140113.3-201ENST00000605663 199 ntBASIC18.16■□□□□ 0.5
LDB1Q86U70 AC011558.1-201ENST00000623459 338 ntBASIC18.16■□□□□ 0.5
LDB1Q86U70 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.16■□□□□ 0.5
LDB1Q86U70 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.16■□□□□ 0.5
LDB1Q86U70 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LDB1Q86U70 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB1Q86U70 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LDB1Q86U70 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LDB1Q86U70 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.15■□□□□ 0.5
LDB1Q86U70 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.15■□□□□ 0.5
LDB1Q86U70 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
LDB1Q86U70 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.15■□□□□ 0.5
LDB1Q86U70 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.15■□□□□ 0.5
LDB1Q86U70 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.15■□□□□ 0.5
LDB1Q86U70 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LDB1Q86U70 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
LDB1Q86U70 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LDB1Q86U70 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LDB1Q86U70 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LDB1Q86U70 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LDB1Q86U70 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
LDB1Q86U70 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.14■□□□□ 0.5
LDB1Q86U70 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LDB1Q86U70 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LDB1Q86U70 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
LDB1Q86U70 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LDB1Q86U70 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LDB1Q86U70 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms