Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 FLJ13224-201ENST00000313737 1514 ntBASIC16.77■□□□□ 0.28
ZNF550Q7Z398 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 AK4P3-201ENST00000418260 669 ntBASIC16.77■□□□□ 0.28
ZNF550Q7Z398 SLC25A6P5-201ENST00000435663 894 ntBASIC16.77■□□□□ 0.28
ZNF550Q7Z398 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 AC009947.2-201ENST00000444014 672 ntBASIC16.77■□□□□ 0.28
ZNF550Q7Z398 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 AC087388.1-201ENST00000571370 1112 ntBASIC16.77■□□□□ 0.28
ZNF550Q7Z398 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 REXO1L9P-201ENST00000604264 2108 ntBASIC16.77■□□□□ 0.28
ZNF550Q7Z398 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.77■□□□□ 0.28
ZNF550Q7Z398 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF550Q7Z398 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.77■□□□□ 0.27
ZNF550Q7Z398 PHGDH-209ENST00000641074 1780 ntBASIC16.77■□□□□ 0.27
ZNF550Q7Z398 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF550Q7Z398 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.77■□□□□ 0.27
ZNF550Q7Z398 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.77■□□□□ 0.27
ZNF550Q7Z398 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 BX664615.1-201ENST00000443558 458 ntBASIC16.76■□□□□ 0.27
ZNF550Q7Z398 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 AL096828.2-201ENST00000567259 1965 ntBASIC16.76■□□□□ 0.27
ZNF550Q7Z398 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 AC018470.1-201ENST00000624790 3129 ntBASIC16.76■□□□□ 0.27
ZNF550Q7Z398 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF550Q7Z398 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 AC117947.1-201ENST00000427448 529 ntBASIC16.75■□□□□ 0.27
ZNF550Q7Z398 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 AC139887.4-201ENST00000607877 719 ntBASIC16.75■□□□□ 0.27
ZNF550Q7Z398 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF550Q7Z398 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms