Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.78■□□□□ 0.28
CHMP1BQ7LBR1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 FAM8A6P-201ENST00000407496 1135 ntBASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 AL359075.1-203ENST00000462729 1002 ntBASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 AL441883.1-201ENST00000566170 1045 ntBASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 AC112497.1-201ENST00000624824 639 ntBASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CHMP1BQ7LBR1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CHMP1BQ7LBR1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 KRT8P32-201ENST00000512863 1461 ntBASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 AC008556.1-201ENST00000610908 2040 ntBASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 AL138781.2-201ENST00000617896 1843 ntBASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms