Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL024508.2-201ENST00000607749 1894 ntBASIC15.09■□□□□ 0.01
VPS13CQ709C8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 FEM1AP3-201ENST00000403722 1741 ntBASIC15.09■□□□□ 0.01
VPS13CQ709C8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VPS13CQ709C8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.09■□□□□ 0.01
VPS13CQ709C8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13CQ709C8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13CQ709C8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13CQ709C8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13CQ709C8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13CQ709C8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13CQ709C8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.08■□□□□ 0.01
VPS13CQ709C8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.08■□□□□ 0.01
VPS13CQ709C8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13CQ709C8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
VPS13CQ709C8 LINC00602-201ENST00000629776 2065 ntBASIC15.08■□□□□ 0.01
VPS13CQ709C8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.08■□□□□ 0
VPS13CQ709C8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.08■□□□□ 0
VPS13CQ709C8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.08■□□□□ 0
VPS13CQ709C8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.08■□□□□ 0
VPS13CQ709C8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
VPS13CQ709C8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.08■□□□□ 0
VPS13CQ709C8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.08■□□□□ 0
VPS13CQ709C8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.08■□□□□ 0
VPS13CQ709C8 AL139400.1-201ENST00000366220 510 ntBASIC15.08■□□□□ 0
VPS13CQ709C8 AL645939.2-201ENST00000427340 991 ntBASIC15.08■□□□□ 0
VPS13CQ709C8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.08■□□□□ 0
VPS13CQ709C8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.08■□□□□ 0
VPS13CQ709C8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.08■□□□□ 0
VPS13CQ709C8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VPS13CQ709C8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
VPS13CQ709C8 AC107918.4-202ENST00000641623 219 ntBASIC15.07■□□□□ 0
VPS13CQ709C8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 AC006504.4-201ENST00000592118 1568 ntBASIC15.07■□□□□ 0
VPS13CQ709C8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 AC002310.6-201ENST00000624451 1377 ntBASIC15.07■□□□□ 0
VPS13CQ709C8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.07■□□□□ 0
VPS13CQ709C8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.07■□□□□ 0
VPS13CQ709C8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
VPS13CQ709C8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.07■□□□□ 0
VPS13CQ709C8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.07■□□□□ 0
VPS13CQ709C8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.07■□□□□ 0
VPS13CQ709C8 MCCD1P2-201ENST00000423228 335 ntBASIC15.07■□□□□ 0
VPS13CQ709C8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.07■□□□□ 0
VPS13CQ709C8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.07■□□□□ 0
VPS13CQ709C8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.07■□□□□ 0
VPS13CQ709C8 AC073592.4-201ENST00000623827 446 ntBASIC15.07■□□□□ 0
VPS13CQ709C8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.07■□□□□ 0
VPS13CQ709C8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13CQ709C8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.07■□□□□ 0
VPS13CQ709C8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.06■□□□□ 0
VPS13CQ709C8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.06■□□□□ 0
VPS13CQ709C8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.06■□□□□ 0
VPS13CQ709C8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.06■□□□□ 0
VPS13CQ709C8 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.06■□□□□ 0
VPS13CQ709C8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.06■□□□□ 0
VPS13CQ709C8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13CQ709C8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.06■□□□□ 0
VPS13CQ709C8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.06■□□□□ 0
VPS13CQ709C8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms