Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 AC083906.6-201ENST00000641366 219 ntBASIC15.87■□□□□ 0.13
C11orf88Q6PI97 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.87■□□□□ 0.13
C11orf88Q6PI97 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf88Q6PI97 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 RPS2P55-201ENST00000397318 883 ntBASIC15.86■□□□□ 0.13
C11orf88Q6PI97 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 AC107956.1-201ENST00000494359 873 ntBASIC15.86■□□□□ 0.13
C11orf88Q6PI97 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 RARRES2P10-201ENST00000564312 460 ntBASIC15.86■□□□□ 0.13
C11orf88Q6PI97 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 AL121829.2-201ENST00000620908 328 ntBASIC15.86■□□□□ 0.13
C11orf88Q6PI97 AC073912.3-201ENST00000624414 853 ntBASIC15.86■□□□□ 0.13
C11orf88Q6PI97 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 TFP1-202ENST00000475455 1573 ntBASIC15.86■□□□□ 0.13
C11orf88Q6PI97 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf88Q6PI97 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms