Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 SNORA78-201ENST00000459373 127 ntBASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 AC011506.1-201ENST00000474329 610 ntBASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 AC116562.2-201ENST00000507042 360 ntBASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 PRSS44-201ENST00000515154 1146 ntBASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 AC130371.2-201ENST00000619443 611 ntBASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 AC073592.3-201ENST00000625118 1834 ntBASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 TSPY23P-201ENST00000440136 739 ntBASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 AC126763.1-201ENST00000552015 2118 ntBASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 DGCR10-201ENST00000609839 495 ntBASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 AC066615.1-201ENST00000640911 628 ntBASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 AC012317.2-201ENST00000623305 2251 ntBASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM53Q6P2H8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 AP003071.4-201ENST00000562276 1284 ntBASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM53Q6P2H8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms