Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF20Q5VT98 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 LINC00602-201ENST00000629776 2065 ntBASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 LINC00265-3P-201ENST00000447588 903 ntBASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 MIR3180-1-201ENST00000580374 94 ntBASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 AC090616.6-201ENST00000582640 721 ntBASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 MIR3180-3-201ENST00000584616 94 ntBASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 AL592071.1-201ENST00000611956 408 ntBASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 AC124864.1-201ENST00000623408 392 ntBASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 AC104581.1-202ENST00000635932 2618 ntBASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PRAMEF20Q5VT98 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 GUSBP12-201ENST00000513727 720 ntBASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 TPSP2-201ENST00000561760 610 ntBASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 AC012313.10-201ENST00000623509 926 ntBASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF20Q5VT98 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEF20Q5VT98 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms