Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 RARRES2P10-201ENST00000564312 460 ntBASIC18.36■□□□□ 0.53
LGSNQ5TDP6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 AC009102.3-201ENST00000623118 1491 ntBASIC18.36■□□□□ 0.53
LGSNQ5TDP6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LGSNQ5TDP6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.35■□□□□ 0.53
LGSNQ5TDP6 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.35■□□□□ 0.53
LGSNQ5TDP6 AL163051.1-201ENST00000569214 1512 ntBASIC18.35■□□□□ 0.53
LGSNQ5TDP6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 MIR149-201ENST00000384879 89 ntBASIC18.35■□□□□ 0.53
LGSNQ5TDP6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LGSNQ5TDP6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 AC073648.6-201ENST00000641589 218 ntBASIC18.34■□□□□ 0.53
LGSNQ5TDP6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LGSNQ5TDP6 KRT18P55-202ENST00000578578 1546 ntBASIC18.33■□□□□ 0.53
LGSNQ5TDP6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LGSNQ5TDP6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 C1QBPP2-201ENST00000528754 825 ntBASIC18.33■□□□□ 0.52
LGSNQ5TDP6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.33■□□□□ 0.52
LGSNQ5TDP6 MIR3180-5-201ENST00000583743 153 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms