Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 AC211486.1-202ENST00000416371 468 ntBASIC22.81■■□□□ 1.24
RC3H1Q5TC82 KRT18P2-201ENST00000447938 1258 ntBASIC22.81■■□□□ 1.24
RC3H1Q5TC82 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 AC211476.1-201ENST00000503899 468 ntBASIC22.81■■□□□ 1.24
RC3H1Q5TC82 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.81■■□□□ 1.24
RC3H1Q5TC82 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 YBX1P5-201ENST00000509441 847 ntBASIC22.8■■□□□ 1.24
RC3H1Q5TC82 AC136632.2-201ENST00000512891 861 ntBASIC22.8■■□□□ 1.24
RC3H1Q5TC82 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.8■■□□□ 1.24
RC3H1Q5TC82 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RC3H1Q5TC82 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.79■■□□□ 1.24
RC3H1Q5TC82 AC108751.1-201ENST00000490852 363 ntBASIC22.79■■□□□ 1.24
RC3H1Q5TC82 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.79■■□□□ 1.24
RC3H1Q5TC82 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 AC005829.1-201ENST00000570002 483 ntBASIC22.78■■□□□ 1.24
RC3H1Q5TC82 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.78■■□□□ 1.24
RC3H1Q5TC82 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms