Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AC244093.1-201ENST00000610837 814 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 SPDYE7P-202ENST00000420373 878 ntBASIC9.86□□□□□ -0.83
UBR4Q5T4S7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 AL353135.1-201ENST00000606729 504 ntBASIC9.86□□□□□ -0.83
UBR4Q5T4S7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 AC025580.3-201ENST00000617932 1424 ntBASIC9.86□□□□□ -0.83
UBR4Q5T4S7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 FP700111.2-201ENST00000619190 1892 ntBASIC9.86□□□□□ -0.83
UBR4Q5T4S7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 DDT-204ENST00000404092 805 ntTSL 3 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 RCC2P3-201ENST00000418112 1537 ntBASIC9.86□□□□□ -0.83
UBR4Q5T4S7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC9.86□□□□□ -0.83
UBR4Q5T4S7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 AC128714.1-201ENST00000637035 887 ntBASIC9.85□□□□□ -0.83
UBR4Q5T4S7 AC006333.2-201ENST00000607957 2099 ntBASIC9.85□□□□□ -0.83
UBR4Q5T4S7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 AL512353.2-201ENST00000448759 1962 ntBASIC9.85□□□□□ -0.83
UBR4Q5T4S7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 RBPMS2P1-201ENST00000437762 623 ntBASIC9.85□□□□□ -0.83
UBR4Q5T4S7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 TIMM8BP1-201ENST00000452384 211 ntBASIC9.85□□□□□ -0.83
UBR4Q5T4S7 KRT18P66-201ENST00000452970 1269 ntBASIC9.85□□□□□ -0.83
UBR4Q5T4S7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 AC092919.2-201ENST00000623631 1645 ntBASIC9.85□□□□□ -0.83
UBR4Q5T4S7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms