Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 AL138831.2-201ENST00000606564 490 ntBASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNFT1Q5M7Z0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNFT1Q5M7Z0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNFT1Q5M7Z0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 AL022342.1-201ENST00000400363 863 ntBASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 RNA5SP419-201ENST00000515908 135 ntBASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNFT1Q5M7Z0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 AC125634.1-201ENST00000438758 1403 ntBASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 KRT18P65-201ENST00000439811 1286 ntBASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 FAM197Y8-203ENST00000450145 560 ntBASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 AC148477.8-201ENST00000624298 468 ntBASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNFT1Q5M7Z0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNFT1Q5M7Z0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms