Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEP78395 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEP78395 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.36■□□□□ 0.53
PRAMEP78395 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEP78395 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEP78395 NEK4P2-201ENST00000580004 1012 ntBASIC18.36■□□□□ 0.53
PRAMEP78395 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.36■□□□□ 0.53
PRAMEP78395 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEP78395 AC010240.3-201ENST00000607688 395 ntBASIC18.36■□□□□ 0.53
PRAMEP78395 AC024243.1-201ENST00000609234 778 ntBASIC18.36■□□□□ 0.53
PRAMEP78395 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEP78395 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEP78395 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEP78395 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEP78395 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEP78395 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PRAMEP78395 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEP78395 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEP78395 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEP78395 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 ECEL1P3-201ENST00000427961 737 ntBASIC18.35■□□□□ 0.53
PRAMEP78395 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PRAMEP78395 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.35■□□□□ 0.53
PRAMEP78395 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEP78395 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEP78395 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 REXO1L9P-201ENST00000604264 2108 ntBASIC18.35■□□□□ 0.53
PRAMEP78395 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEP78395 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEP78395 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEP78395 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRAMEP78395 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PRAMEP78395 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PRAMEP78395 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEP78395 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PRAMEP78395 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
PRAMEP78395 SEC1P-202ENST00000473944 940 ntBASIC18.34■□□□□ 0.53
PRAMEP78395 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEP78395 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEP78395 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.34■□□□□ 0.53
PRAMEP78395 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.34■□□□□ 0.53
PRAMEP78395 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PRAMEP78395 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEP78395 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEP78395 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEP78395 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEP78395 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEP78395 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEP78395 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEP78395 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEP78395 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEP78395 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.33■□□□□ 0.53
PRAMEP78395 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEP78395 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEP78395 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.33■□□□□ 0.53
PRAMEP78395 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PRAMEP78395 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEP78395 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEP78395 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms