Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TPM4P67936 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TPM4P67936 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TPM4P67936 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.4■□□□□ 0.86
TPM4P67936 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 MIR564-202ENST00000385049 94 ntBASIC20.4■□□□□ 0.86
TPM4P67936 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.4■□□□□ 0.86
TPM4P67936 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.4■□□□□ 0.86
TPM4P67936 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
TPM4P67936 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.4■□□□□ 0.86
TPM4P67936 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.4■□□□□ 0.86
TPM4P67936 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.4■□□□□ 0.86
TPM4P67936 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.4■□□□□ 0.86
TPM4P67936 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TPM4P67936 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TPM4P67936 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.4■□□□□ 0.86
TPM4P67936 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TPM4P67936 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TPM4P67936 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TPM4P67936 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TPM4P67936 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TPM4P67936 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TPM4P67936 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TPM4P67936 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.86
TPM4P67936 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.39■□□□□ 0.86
TPM4P67936 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TPM4P67936 AC034236.2-201ENST00000606662 1610 ntBASIC20.39■□□□□ 0.86
TPM4P67936 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TPM4P67936 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.39■□□□□ 0.85
TPM4P67936 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 FAM207BP-201ENST00000447172 505 ntBASIC20.39■□□□□ 0.85
TPM4P67936 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 AC142086.2-201ENST00000569753 217 ntBASIC20.39■□□□□ 0.85
TPM4P67936 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.39■□□□□ 0.85
TPM4P67936 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM4P67936 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.39■□□□□ 0.85
TPM4P67936 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.39■□□□□ 0.85
TPM4P67936 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TPM4P67936 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 AC099398.1-201ENST00000567919 2776 ntBASIC20.38■□□□□ 0.85
TPM4P67936 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 AC026366.1-201ENST00000488803 879 ntBASIC20.38■□□□□ 0.85
TPM4P67936 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 AC026271.3-201ENST00000571884 352 ntBASIC20.38■□□□□ 0.85
TPM4P67936 AL353708.3-201ENST00000610272 989 ntBASIC20.38■□□□□ 0.85
TPM4P67936 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TPM4P67936 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM4P67936 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM4P67936 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 KRT16P1-201ENST00000399124 1418 ntBASIC20.37■□□□□ 0.85
TPM4P67936 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TPM4P67936 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM4P67936 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms