Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
SKP1P63208 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SKP1P63208 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.27■□□□□ 0.36
SKP1P63208 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.27■□□□□ 0.36
SKP1P63208 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.27■□□□□ 0.36
SKP1P63208 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.27■□□□□ 0.36
SKP1P63208 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.27■□□□□ 0.36
SKP1P63208 GPR32P1-201ENST00000601788 811 ntBASIC17.27■□□□□ 0.36
SKP1P63208 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.27■□□□□ 0.36
SKP1P63208 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.27■□□□□ 0.36
SKP1P63208 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SKP1P63208 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.27■□□□□ 0.35
SKP1P63208 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKP1P63208 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
SKP1P63208 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SKP1P63208 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SKP1P63208 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKP1P63208 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.27■□□□□ 0.35
SKP1P63208 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKP1P63208 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SKP1P63208 IER3-202ENST00000376377 1350 ntBASIC17.27■□□□□ 0.35
SKP1P63208 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.27■□□□□ 0.35
SKP1P63208 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SKP1P63208 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SKP1P63208 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.26■□□□□ 0.35
SKP1P63208 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SKP1P63208 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SKP1P63208 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SKP1P63208 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SKP1P63208 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.26■□□□□ 0.35
SKP1P63208 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.26■□□□□ 0.35
SKP1P63208 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.26■□□□□ 0.35
SKP1P63208 PCED1CP-201ENST00000419887 785 ntBASIC17.26■□□□□ 0.35
SKP1P63208 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.26■□□□□ 0.35
SKP1P63208 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
SKP1P63208 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 FAM86EP-206ENST00000510506 987 ntBASIC17.26■□□□□ 0.35
SKP1P63208 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.26■□□□□ 0.35
SKP1P63208 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.26■□□□□ 0.35
SKP1P63208 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SKP1P63208 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.26■□□□□ 0.35
SKP1P63208 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SKP1P63208 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.26■□□□□ 0.35
SKP1P63208 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SKP1P63208 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SKP1P63208 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.26■□□□□ 0.35
SKP1P63208 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SKP1P63208 AC005082.1-201ENST00000413042 2259 ntBASIC17.26■□□□□ 0.35
SKP1P63208 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SKP1P63208 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 AC005332.1-201ENST00000577698 1310 ntBASIC17.25■□□□□ 0.35
SKP1P63208 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SKP1P63208 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.25■□□□□ 0.35
SKP1P63208 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SKP1P63208 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.25■□□□□ 0.35
SKP1P63208 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.25■□□□□ 0.35
SKP1P63208 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SKP1P63208 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.25■□□□□ 0.35
SKP1P63208 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SKP1P63208 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SKP1P63208 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.25■□□□□ 0.35
SKP1P63208 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SKP1P63208 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SKP1P63208 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SKP1P63208 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.25■□□□□ 0.35
SKP1P63208 ESPNP-201ENST00000270691 2015 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms