Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SEC61A1P61619 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SEC61A1P61619 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SEC61A1P61619 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SEC61A1P61619 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.95■□□□□ 0.14
SEC61A1P61619 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 KRT18P22-201ENST00000402024 1347 ntBASIC15.94■□□□□ 0.14
SEC61A1P61619 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SEC61A1P61619 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.94■□□□□ 0.14
SEC61A1P61619 AC005521.1-201ENST00000393351 872 ntBASIC15.94■□□□□ 0.14
SEC61A1P61619 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 KRT18P57-201ENST00000443599 1254 ntBASIC15.94■□□□□ 0.14
SEC61A1P61619 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.94■□□□□ 0.14
SEC61A1P61619 AC005363.2-201ENST00000618631 242 ntBASIC15.94■□□□□ 0.14
SEC61A1P61619 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SEC61A1P61619 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
SEC61A1P61619 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 FEM1AP3-201ENST00000403722 1741 ntBASIC15.94■□□□□ 0.14
SEC61A1P61619 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SEC61A1P61619 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61A1P61619 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61A1P61619 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SEC61A1P61619 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
SEC61A1P61619 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.93■□□□□ 0.14
SEC61A1P61619 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SEC61A1P61619 TSPY14P-201ENST00000303979 915 ntBASIC15.93■□□□□ 0.14
SEC61A1P61619 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 SLC25A3P1-201ENST00000443844 931 ntBASIC15.93■□□□□ 0.14
SEC61A1P61619 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.93■□□□□ 0.14
SEC61A1P61619 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.93■□□□□ 0.14
SEC61A1P61619 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.93■□□□□ 0.14
SEC61A1P61619 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.93■□□□□ 0.14
SEC61A1P61619 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
SEC61A1P61619 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.93■□□□□ 0.14
SEC61A1P61619 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SEC61A1P61619 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.93■□□□□ 0.14
SEC61A1P61619 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SEC61A1P61619 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SEC61A1P61619 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.93■□□□□ 0.14
SEC61A1P61619 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61A1P61619 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.92■□□□□ 0.14
SEC61A1P61619 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 AL162741.1-201ENST00000565563 1558 ntBASIC15.92■□□□□ 0.14
SEC61A1P61619 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SEC61A1P61619 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms