Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CXCR4P61073 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.59■□□□□ 0.25
CXCR4P61073 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.59■□□□□ 0.25
CXCR4P61073 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.59■□□□□ 0.25
CXCR4P61073 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.59■□□□□ 0.25
CXCR4P61073 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CXCR4P61073 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.59■□□□□ 0.25
CXCR4P61073 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.59■□□□□ 0.25
CXCR4P61073 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.59■□□□□ 0.25
CXCR4P61073 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CXCR4P61073 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.59■□□□□ 0.25
CXCR4P61073 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.59■□□□□ 0.25
CXCR4P61073 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.59■□□□□ 0.25
CXCR4P61073 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CXCR4P61073 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
CXCR4P61073 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXCR4P61073 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CXCR4P61073 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CXCR4P61073 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.58■□□□□ 0.25
CXCR4P61073 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CXCR4P61073 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CXCR4P61073 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CXCR4P61073 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CXCR4P61073 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CXCR4P61073 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CXCR4P61073 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CXCR4P61073 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CXCR4P61073 AL355802.2-201ENST00000402069 882 ntBASIC16.58■□□□□ 0.24
CXCR4P61073 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.58■□□□□ 0.24
CXCR4P61073 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.58■□□□□ 0.24
CXCR4P61073 KRT16P5-201ENST00000455284 522 ntBASIC16.58■□□□□ 0.24
CXCR4P61073 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.58■□□□□ 0.24
CXCR4P61073 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.58■□□□□ 0.24
CXCR4P61073 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.58■□□□□ 0.24
CXCR4P61073 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CXCR4P61073 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.58■□□□□ 0.24
CXCR4P61073 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 AL023875.1-201ENST00000640777 796 ntBASIC16.58■□□□□ 0.24
CXCR4P61073 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.58■□□□□ 0.24
CXCR4P61073 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.58■□□□□ 0.24
CXCR4P61073 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
CXCR4P61073 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.58■□□□□ 0.24
CXCR4P61073 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CXCR4P61073 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CXCR4P61073 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.57■□□□□ 0.24
CXCR4P61073 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CXCR4P61073 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.57■□□□□ 0.24
CXCR4P61073 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.57■□□□□ 0.24
CXCR4P61073 AL109659.2-201ENST00000606809 1674 ntBASIC16.57■□□□□ 0.24
CXCR4P61073 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 AC239809.2-201ENST00000415381 517 ntBASIC16.57■□□□□ 0.24
CXCR4P61073 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.57■□□□□ 0.24
CXCR4P61073 AC233263.1-201ENST00000578059 224 ntBASIC16.57■□□□□ 0.24
CXCR4P61073 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.57■□□□□ 0.24
CXCR4P61073 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms