Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 MYC-208ENST00000641036 567 ntBASIC16.69■□□□□ 0.26
CLDN20P56880 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLDN20P56880 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CLDN20P56880 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN20P56880 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CLDN20P56880 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN20P56880 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLDN20P56880 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN20P56880 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 AL499627.1-201ENST00000569373 2188 ntBASIC16.68■□□□□ 0.26
CLDN20P56880 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLDN20P56880 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN20P56880 AC106820.2-201ENST00000563775 3264 ntBASIC16.68■□□□□ 0.26
CLDN20P56880 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 RASA4DP-201ENST00000460726 1199 ntBASIC16.68■□□□□ 0.26
CLDN20P56880 AC104390.1-201ENST00000555663 520 ntBASIC16.68■□□□□ 0.26
CLDN20P56880 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN20P56880 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN20P56880 AL157888.1-201ENST00000631930 593 ntBASIC16.68■□□□□ 0.26
CLDN20P56880 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLDN20P56880 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN20P56880 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN20P56880 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN20P56880 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN20P56880 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
CLDN20P56880 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN20P56880 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.67■□□□□ 0.26
CLDN20P56880 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN20P56880 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN20P56880 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 AC034232.1-201ENST00000506026 1064 ntBASIC16.67■□□□□ 0.26
CLDN20P56880 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN20P56880 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.67■□□□□ 0.26
CLDN20P56880 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN20P56880 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CLDN20P56880 AC010240.3-201ENST00000607688 395 ntBASIC16.67■□□□□ 0.26
CLDN20P56880 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN20P56880 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 KRT8P50-201ENST00000562022 1438 ntBASIC16.67■□□□□ 0.26
CLDN20P56880 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN20P56880 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN20P56880 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN20P56880 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN20P56880 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN20P56880 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLDN20P56880 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN20P56880 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms