Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.62□□□□□ -0.07
PAX9P55771 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PAX9P55771 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.61□□□□□ -0.07
PAX9P55771 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PAX9P55771 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PAX9P55771 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.61□□□□□ -0.07
PAX9P55771 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.61□□□□□ -0.07
PAX9P55771 AL355802.2-201ENST00000402069 882 ntBASIC14.61□□□□□ -0.07
PAX9P55771 AL023284.2-201ENST00000405850 579 ntBASIC14.61□□□□□ -0.07
PAX9P55771 NIFKP9-201ENST00000419265 221 ntBASIC14.61□□□□□ -0.07
PAX9P55771 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.61□□□□□ -0.07
PAX9P55771 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.61□□□□□ -0.07
PAX9P55771 UNC93B5-201ENST00000530315 699 ntBASIC14.61□□□□□ -0.07
PAX9P55771 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PAX9P55771 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.61□□□□□ -0.07
PAX9P55771 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.61□□□□□ -0.07
PAX9P55771 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.61□□□□□ -0.07
PAX9P55771 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PAX9P55771 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.61□□□□□ -0.07
PAX9P55771 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PAX9P55771 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 AL163051.1-201ENST00000569214 1512 ntBASIC14.61□□□□□ -0.07
PAX9P55771 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.61□□□□□ -0.07
PAX9P55771 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.61□□□□□ -0.07
PAX9P55771 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PAX9P55771 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.6□□□□□ -0.07
PAX9P55771 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PAX9P55771 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PAX9P55771 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.6□□□□□ -0.07
PAX9P55771 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.6□□□□□ -0.07
PAX9P55771 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.6□□□□□ -0.07
PAX9P55771 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 AC009102.3-201ENST00000623118 1491 ntBASIC14.6□□□□□ -0.07
PAX9P55771 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.6□□□□□ -0.07
PAX9P55771 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PAX9P55771 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PAX9P55771 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.59□□□□□ -0.07
PAX9P55771 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.59□□□□□ -0.07
PAX9P55771 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.59□□□□□ -0.07
PAX9P55771 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 AC133963.1-201ENST00000504166 1679 ntBASIC14.59□□□□□ -0.07
PAX9P55771 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.59□□□□□ -0.07
PAX9P55771 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.59□□□□□ -0.07
PAX9P55771 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.59□□□□□ -0.07
PAX9P55771 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.59□□□□□ -0.07
PAX9P55771 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PAX9P55771 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PAX9P55771 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms