Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.86■□□□□ 0.45
PKNOX1P55347 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PKNOX1P55347 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PKNOX1P55347 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PKNOX1P55347 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKNOX1P55347 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.86■□□□□ 0.45
PKNOX1P55347 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.85■□□□□ 0.45
PKNOX1P55347 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PKNOX1P55347 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PKNOX1P55347 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.85■□□□□ 0.45
PKNOX1P55347 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PKNOX1P55347 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PKNOX1P55347 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 KRT8P7-201ENST00000533003 1432 ntBASIC17.85■□□□□ 0.45
PKNOX1P55347 AC036111.1-201ENST00000533973 1582 ntBASIC17.85■□□□□ 0.45
PKNOX1P55347 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.85■□□□□ 0.45
PKNOX1P55347 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.85■□□□□ 0.45
PKNOX1P55347 AL163051.1-201ENST00000569214 1512 ntBASIC17.85■□□□□ 0.45
PKNOX1P55347 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 MIR4674-201ENST00000582457 87 ntBASIC17.85■□□□□ 0.45
PKNOX1P55347 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PKNOX1P55347 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 AC026471.5-201ENST00000615068 467 ntBASIC17.85■□□□□ 0.45
PKNOX1P55347 AC080080.1-201ENST00000625121 2420 ntBASIC17.85■□□□□ 0.45
PKNOX1P55347 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.85■□□□□ 0.45
PKNOX1P55347 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.85■□□□□ 0.45
PKNOX1P55347 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PKNOX1P55347 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.84■□□□□ 0.45
PKNOX1P55347 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PKNOX1P55347 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PKNOX1P55347 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.84■□□□□ 0.45
PKNOX1P55347 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PKNOX1P55347 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PKNOX1P55347 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.84■□□□□ 0.45
PKNOX1P55347 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.84■□□□□ 0.45
PKNOX1P55347 MIR149-201ENST00000384879 89 ntBASIC17.84■□□□□ 0.45
PKNOX1P55347 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.84■□□□□ 0.45
PKNOX1P55347 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.84■□□□□ 0.45
PKNOX1P55347 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.84■□□□□ 0.45
PKNOX1P55347 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.84■□□□□ 0.45
PKNOX1P55347 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.84■□□□□ 0.45
PKNOX1P55347 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PKNOX1P55347 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKNOX1P55347 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKNOX1P55347 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKNOX1P55347 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PKNOX1P55347 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKNOX1P55347 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PKNOX1P55347 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.83■□□□□ 0.45
PKNOX1P55347 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKNOX1P55347 AC009102.3-201ENST00000623118 1491 ntBASIC17.83■□□□□ 0.45
PKNOX1P55347 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.83■□□□□ 0.45
PKNOX1P55347 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PKNOX1P55347 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PKNOX1P55347 AL096828.2-201ENST00000567259 1965 ntBASIC17.83■□□□□ 0.44
PKNOX1P55347 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PKNOX1P55347 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PKNOX1P55347 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.83■□□□□ 0.44
PKNOX1P55347 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PKNOX1P55347 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
PKNOX1P55347 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.83■□□□□ 0.44
PKNOX1P55347 SLC25A1P2-201ENST00000430693 912 ntBASIC17.83■□□□□ 0.44
PKNOX1P55347 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PKNOX1P55347 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.83■□□□□ 0.44
PKNOX1P55347 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PKNOX1P55347 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PKNOX1P55347 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms