Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.03■□□□□ 0.64
HADHBP55084 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHBP55084 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHBP55084 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHBP55084 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HADHBP55084 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HADHBP55084 PVRIG2P-201ENST00000435460 978 ntBASIC19.03■□□□□ 0.64
HADHBP55084 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHBP55084 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.03■□□□□ 0.64
HADHBP55084 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HADHBP55084 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.03■□□□□ 0.64
HADHBP55084 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.03■□□□□ 0.64
HADHBP55084 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHBP55084 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
HADHBP55084 AC024243.1-201ENST00000609234 778 ntBASIC19.03■□□□□ 0.64
HADHBP55084 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HADHBP55084 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHBP55084 AC108860.2-201ENST00000562760 2183 ntBASIC19.03■□□□□ 0.64
HADHBP55084 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HADHBP55084 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.03■□□□□ 0.64
HADHBP55084 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
HADHBP55084 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
HADHBP55084 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.02■□□□□ 0.64
HADHBP55084 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 AC022898.2-201ENST00000616822 1312 ntBASIC19.02■□□□□ 0.64
HADHBP55084 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 AC133963.1-201ENST00000504166 1679 ntBASIC19.02■□□□□ 0.64
HADHBP55084 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.02■□□□□ 0.64
HADHBP55084 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HADHBP55084 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HADHBP55084 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.02■□□□□ 0.64
HADHBP55084 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.02■□□□□ 0.64
HADHBP55084 SNORA78-201ENST00000459373 127 ntBASIC19.02■□□□□ 0.64
HADHBP55084 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.02■□□□□ 0.64
HADHBP55084 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
HADHBP55084 FAM87A-204ENST00000613235 858 ntBASIC19.02■□□□□ 0.64
HADHBP55084 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HADHBP55084 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HADHBP55084 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HADHBP55084 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HADHBP55084 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.02■□□□□ 0.63
HADHBP55084 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
HADHBP55084 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HADHBP55084 AL138688.1-201ENST00000624851 1594 ntBASIC19.02■□□□□ 0.63
HADHBP55084 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HADHBP55084 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHBP55084 KRT8P9-201ENST00000558927 1449 ntBASIC19.01■□□□□ 0.63
HADHBP55084 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
HADHBP55084 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
HADHBP55084 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 AL355312.1-201ENST00000407115 2176 ntBASIC19.01■□□□□ 0.63
HADHBP55084 PRORSD1P-202ENST00000563365 2154 ntBASIC19.01■□□□□ 0.63
HADHBP55084 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 AC113404.2-201ENST00000507884 177 ntBASIC19.01■□□□□ 0.63
HADHBP55084 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHBP55084 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.01■□□□□ 0.63
HADHBP55084 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.01■□□□□ 0.63
HADHBP55084 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHBP55084 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.01■□□□□ 0.63
HADHBP55084 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
HADHBP55084 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HADHBP55084 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HADHBP55084 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19■□□□□ 0.63
HADHBP55084 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19■□□□□ 0.63
HADHBP55084 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms