Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.07■□□□□ 0.48
NUBP1P53384 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.07■□□□□ 0.48
NUBP1P53384 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.07■□□□□ 0.48
NUBP1P53384 AC012645.4-201ENST00000610691 1061 ntBASIC18.07■□□□□ 0.48
NUBP1P53384 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NUBP1P53384 AL589182.2-201ENST00000619332 1049 ntBASIC18.07■□□□□ 0.48
NUBP1P53384 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.07■□□□□ 0.48
NUBP1P53384 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.07■□□□□ 0.48
NUBP1P53384 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUBP1P53384 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NUBP1P53384 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.07■□□□□ 0.48
NUBP1P53384 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUBP1P53384 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUBP1P53384 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUBP1P53384 Z98044.1-201ENST00000632503 1764 ntBASIC18.07■□□□□ 0.48
NUBP1P53384 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUBP1P53384 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.06■□□□□ 0.48
NUBP1P53384 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
NUBP1P53384 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.06■□□□□ 0.48
NUBP1P53384 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NUBP1P53384 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.06■□□□□ 0.48
NUBP1P53384 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.06■□□□□ 0.48
NUBP1P53384 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC18.06■□□□□ 0.48
NUBP1P53384 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 MIR149-201ENST00000384879 89 ntBASIC18.06■□□□□ 0.48
NUBP1P53384 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 HCG4B-203ENST00000450128 991 ntBASIC18.06■□□□□ 0.48
NUBP1P53384 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.06■□□□□ 0.48
NUBP1P53384 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.06■□□□□ 0.48
NUBP1P53384 AC087641.1-201ENST00000557561 1021 ntBASIC18.06■□□□□ 0.48
NUBP1P53384 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.06■□□□□ 0.48
NUBP1P53384 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.06■□□□□ 0.48
NUBP1P53384 AL031432.2-201ENST00000566714 459 ntBASIC18.06■□□□□ 0.48
NUBP1P53384 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.06■□□□□ 0.48
NUBP1P53384 AL928711.1-201ENST00000570165 459 ntBASIC18.06■□□□□ 0.48
NUBP1P53384 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.06■□□□□ 0.48
NUBP1P53384 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NUBP1P53384 AC068587.9-201ENST00000641814 219 ntBASIC18.06■□□□□ 0.48
NUBP1P53384 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.06■□□□□ 0.48
NUBP1P53384 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 GPR89P-201ENST00000407924 1495 ntBASIC18.06■□□□□ 0.48
NUBP1P53384 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.06■□□□□ 0.48
NUBP1P53384 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.06■□□□□ 0.48
NUBP1P53384 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUBP1P53384 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.05■□□□□ 0.48
NUBP1P53384 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.05■□□□□ 0.48
NUBP1P53384 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.05■□□□□ 0.48
NUBP1P53384 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.05■□□□□ 0.48
NUBP1P53384 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.05■□□□□ 0.48
NUBP1P53384 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.05■□□□□ 0.48
NUBP1P53384 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.05■□□□□ 0.48
NUBP1P53384 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.05■□□□□ 0.48
NUBP1P53384 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NUBP1P53384 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.05■□□□□ 0.48
NUBP1P53384 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.05■□□□□ 0.48
NUBP1P53384 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
NUBP1P53384 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.05■□□□□ 0.48
NUBP1P53384 AC092451.2-201ENST00000538746 658 ntBASIC18.05■□□□□ 0.48
NUBP1P53384 AC069262.1-201ENST00000539058 672 ntBASIC18.05■□□□□ 0.48
NUBP1P53384 AC015911.4-201ENST00000588022 1070 ntBASIC18.05■□□□□ 0.48
NUBP1P53384 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.05■□□□□ 0.48
NUBP1P53384 AL353135.1-201ENST00000606729 504 ntBASIC18.05■□□□□ 0.48
NUBP1P53384 AP000720.1-201ENST00000625091 483 ntBASIC18.05■□□□□ 0.48
NUBP1P53384 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.05■□□□□ 0.48
NUBP1P53384 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.05■□□□□ 0.48
NUBP1P53384 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NUBP1P53384 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUBP1P53384 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.05■□□□□ 0.48
NUBP1P53384 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NUBP1P53384 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUBP1P53384 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NUBP1P53384 AF106564.1-201ENST00000607058 2553 ntBASIC18.04■□□□□ 0.48
NUBP1P53384 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUBP1P53384 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms