Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDR1P51861 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR1P51861 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.91■□□□□ 0.78
CDR1P51861 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR1P51861 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDR1P51861 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR1P51861 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.91■□□□□ 0.78
CDR1P51861 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDR1P51861 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDR1P51861 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDR1P51861 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDR1P51861 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDR1P51861 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDR1P51861 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.91■□□□□ 0.78
CDR1P51861 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDR1P51861 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR1P51861 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR1P51861 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.9■□□□□ 0.78
CDR1P51861 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CDR1P51861 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.9■□□□□ 0.78
CDR1P51861 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDR1P51861 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.9■□□□□ 0.78
CDR1P51861 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.9■□□□□ 0.78
CDR1P51861 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR1P51861 AL671277.2-201ENST00000458060 996 ntBASIC19.9■□□□□ 0.78
CDR1P51861 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.9■□□□□ 0.78
CDR1P51861 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.9■□□□□ 0.78
CDR1P51861 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.9■□□□□ 0.78
CDR1P51861 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR1P51861 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR1P51861 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.9■□□□□ 0.78
CDR1P51861 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR1P51861 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.9■□□□□ 0.78
CDR1P51861 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.9■□□□□ 0.78
CDR1P51861 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 AC090164.3-201ENST00000610780 2143 ntBASIC19.9■□□□□ 0.78
CDR1P51861 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR1P51861 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.9■□□□□ 0.78
CDR1P51861 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDR1P51861 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.89■□□□□ 0.78
CDR1P51861 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.89■□□□□ 0.77
CDR1P51861 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.89■□□□□ 0.77
CDR1P51861 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 AL512604.3-201ENST00000569583 964 ntBASIC19.89■□□□□ 0.77
CDR1P51861 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.89■□□□□ 0.77
CDR1P51861 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDR1P51861 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDR1P51861 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.89■□□□□ 0.77
CDR1P51861 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDR1P51861 AC009113.1-201ENST00000570267 2443 ntBASIC19.88■□□□□ 0.77
CDR1P51861 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.88■□□□□ 0.77
CDR1P51861 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDR1P51861 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.88■□□□□ 0.77
CDR1P51861 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.88■□□□□ 0.77
CDR1P51861 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.88■□□□□ 0.77
CDR1P51861 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 OR6D1P-203ENST00000641209 4860 ntBASIC19.88■□□□□ 0.77
CDR1P51861 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.88■□□□□ 0.77
CDR1P51861 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDR1P51861 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDR1P51861 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.88■□□□□ 0.77
CDR1P51861 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.88■□□□□ 0.77
CDR1P51861 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.88■□□□□ 0.77
CDR1P51861 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CDR1P51861 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDR1P51861 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms