Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCNKAP51800 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLCNKAP51800 KRT18P1-202ENST00000452408 1331 ntBASIC17.81■□□□□ 0.44
CLCNKAP51800 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLCNKAP51800 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCNKAP51800 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCNKAP51800 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCNKAP51800 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 TPSP2-201ENST00000561760 610 ntBASIC17.81■□□□□ 0.44
CLCNKAP51800 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLCNKAP51800 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCNKAP51800 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLCNKAP51800 AC092119.3-201ENST00000612618 583 ntBASIC17.81■□□□□ 0.44
CLCNKAP51800 AC004263.2-201ENST00000617183 678 ntBASIC17.81■□□□□ 0.44
CLCNKAP51800 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLCNKAP51800 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLCNKAP51800 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.81■□□□□ 0.44
CLCNKAP51800 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCNKAP51800 ESPNP-201ENST00000270691 2015 ntBASIC17.81■□□□□ 0.44
CLCNKAP51800 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLCNKAP51800 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLCNKAP51800 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCNKAP51800 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.8■□□□□ 0.44
CLCNKAP51800 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
CLCNKAP51800 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCNKAP51800 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCNKAP51800 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.8■□□□□ 0.44
CLCNKAP51800 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCNKAP51800 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCNKAP51800 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCNKAP51800 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 IGHV3-41-201ENST00000613121 348 ntBASIC17.8■□□□□ 0.44
CLCNKAP51800 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CLCNKAP51800 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLCNKAP51800 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCNKAP51800 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCNKAP51800 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLCNKAP51800 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLCNKAP51800 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCNKAP51800 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCNKAP51800 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLCNKAP51800 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCNKAP51800 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCNKAP51800 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLCNKAP51800 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.79■□□□□ 0.44
CLCNKAP51800 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCNKAP51800 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CLCNKAP51800 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCNKAP51800 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCNKAP51800 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms